STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2065Chorismate mutase. (128 aa)    
Predicted Functional Partners:
CF8_2064
Prephenate dehydrogenase.
  
 
  0.991
CF8_0096
Prephenate dehydratase.
    
 0.954
CF8_1911
Chorismate synthase.
  
 
 0.944
CF8_3614
Anthranilate synthase, component II.
    
  0.898
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.821
cmk
Cytidylate kinase.
       0.821
CF8_3616
Anthranilate synthase component.
    
  0.813
CF8_0445
Isochorismate synthase.
  
  
  0.801
CF8_3613
Anthranilate synthase component.
    
  0.788
CF8_2062
Phospholipid/glycerol acyltransferase.
       0.777
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.