STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2104FAD dependent oxidoreductase. (495 aa)    
Predicted Functional Partners:
CF8_2106
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.918
CF8_2105
Alpha/beta hydrolase fold protein.
   
 
 0.797
CF8_2102
4Fe-4S ferredoxin iron-sulfur binding protein.
    
 0.740
CF8_2101
Hypothetical protein.
       0.732
CF8_2103
Transcriptional regulator.
       0.714
CF8_3233
Putative monooxygenase.
  
  
 
0.694
CF8_1810
Cyclohexanone monooxygenase.
  
  
 
0.692
CF8_3468
FAD dependent oxidoreductase.
  
  
 
0.691
atpA
F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.671
CF8_2107
Phosphoserine phosphatase.
 
     0.651
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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