STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2139FeS assembly protein SufD. (385 aa)    
Predicted Functional Partners:
CF8_2137
FeS assembly ATPase SufC.
 
 
 0.999
CF8_2136
SufS subfamily cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.984
CF8_2135
NifU family SUF system FeS assembly protein.
 
  
 0.976
CF8_2134
Hypothetical protein.
 
   
 0.927
CF8_2140
FeS assembly protein SufB.
 
   
0.849
CF8_2138
Rieske (2Fe-2S) domain-containing protein.
       0.841
CF8_0224
Aminotransferase class V.
  
 
 0.794
CF8_2141
Transcriptional regulator.
  
    0.711
CF8_2133
Hypothetical protein.
       0.623
CF8_2773
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.564
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.