Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_2170Rieske (2Fe-2S) domain-containing protein. (378 aa)    
Predicted Functional Partners:
CF8_2168
Ferredoxin.
 
 
 0.984
CF8_0566
Aromatic-ring-hydroxylating dioxygenase, beta.
  
 0.978
CF8_2218
3-ketosteroid-delta-1-dehydrogenase.
 
  
 0.976
CF8_0565
Short-chain dehydrogenase/reductase SDR.
  
 
 0.914
CF8_0369
FAD dependent oxidoreductase; Belongs to the GcvT family.
  
 
 0.876
CF8_2171
acyl-CoA dehydrogenase domain-containing.
 
     0.864
CF8_2169
Hypothetical protein.
  
    0.847
CF8_3663
2,4-dienoyl-CoA reductase.
  
 
 0.802
CF8_2245
TetR family transcriptional regulator.
  
  
 0.791
CF8_2215
Glyoxalase/bleomycin resistance.
  
   
 0.776
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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