STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2172acyl-CoA dehydrogenase domain-containing. (364 aa)    
Predicted Functional Partners:
CF8_2171
acyl-CoA dehydrogenase domain-containing.
    
0.884
CF8_1498
Electron transfer flavoprotein, alpha subunit.
   0.844
CF8_1497
Electron transfer flavoprotein beta-subunit.
 
   0.830
CF8_2315
3-hydroxyacyl-CoA dehydrogenase.
  
 0.747
CF8_3649
Short chain enoyl-CoA hydratase.
  
 0.747
CF8_2209
acyl-CoA dehydrogenase domain-containing.
 
     0.730
CF8_1690
acyl-CoA dehydrogenase domain-containing.
  
     0.676
CF8_2170
Rieske (2Fe-2S) domain-containing protein.
 
     0.674
CF8_2175
acyl-CoA synthetase.
  
 
  0.642
CF8_1438
methylmalonyl-CoA mutase.
    
 0.625
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.