Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_2189acetyl-CoA acetyltransferase. (385 aa)    
Predicted Functional Partners:
CF8_3649
Short chain enoyl-CoA hydratase.
  
 0.990
CF8_2187
Hypothetical protein.
 
  0.987
CF8_2315
3-hydroxyacyl-CoA dehydrogenase.
  
 0.983
CF8_2227
Hypothetical protein.
 
 0.965
CF8_2046
enoyl-CoA hydratase.
  
  0.883
CF8_1445
3-hydroxyacyl-CoA dehydrogenase.
  
 0.879
CF8_1446
3-hydroxyacyl-CoA dehydrogenase.
  
 0.879
CF8_0296
acyl-CoA oxidase domain-containing protein.
   
  0.851
CF8_2047
Coenzyme A transferase.
 
 
  0.851
CF8_2048
Putative CoA transferase beta subunit.
 
 
  0.847
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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