Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CF8_2192Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (259 aa)    
Predicted Functional Partners:
CF8_0284
Short chain dehydrogenase.
  
 
  0.868
CF8_3998
Short chain dehydrogenase.
  
 
  0.855
CF8_2122
Short-chain dehydrogenase/reductase SDR.
  
 
  0.822
CF8_2503
Glutamate synthase (NADH) large subunit.
    
  0.753
CF8_3496
Short chain dehydrogenase.
  
 
 
0.621
CF8_4005
Short-chain dehydrogenase/reductase SDR.
  
 
 
0.620
CF8_2247
Short-chain dehydrogenase/reductase SDR.
  
 
 
0.619
CF8_4164
Short-chain dehydrogenase/reductase SDR.
  
 
 
0.617
CF8_2202
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
0.614
CF8_2045
Short chain dehydrogenase.
  
 
 
0.613
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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