Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CF8_2194ATPase domain-containing protein. (463 aa)    
Predicted Functional Partners:
CF8_2195
Thioredoxin reductase.
 
 0.983
CF8_3398
Hypothetical protein.
  
 0.981
CF8_1408
Alpha-ketoglutarate decarboxylase.
    
 0.826
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
  0.762
CF8_3599
Transketolase, central region.
    
  0.762
CF8_3026
Protein phosphatase 2C domain-containing.
    
 0.754
CF8_2420
Thioredoxin reductase.
 
 
 0.740
CF8_2193
Transcriptional regulatory protein AraC/XylS.
       0.671
CF8_3600
Pyruvate dehydrogenase (acetyl-transferring).
    
  0.651
CF8_2197
ABC transporter-like protein.
   
   0.633
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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