STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2194ATPase domain-containing protein. (463 aa)    
Predicted Functional Partners:
CF8_3398
Hypothetical protein.
  
 0.999
CF8_2195
Thioredoxin reductase.
 
 0.986
CF8_1408
Alpha-ketoglutarate decarboxylase.
    
 0.873
CF8_3598
Dehydrogenase catalytic domain-containing.
    
  0.840
CF8_3599
Transketolase, central region.
    
  0.807
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
  0.790
CF8_2420
Thioredoxin reductase.
 
 
 0.751
CF8_2266
FAD-dependent pyridine nucleotide-disulfide.
    
  0.691
CF8_2429
Dihydrolipoamide dehydrogenase.
    
  0.691
CF8_3031
Flavoprotein disulfide reductase.
    
  0.691
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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