STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2209acyl-CoA dehydrogenase domain-containing. (388 aa)    
Predicted Functional Partners:
CF8_2208
Short chain dehydrogenase.
 
   0.927
CF8_2212
acyl-CoA dehydrogenase domain-containing; Overlaps another CDS with the same product name.
     0.918
CF8_2211
acyl-CoA dehydrogenase domain-containing; Overlaps another CDS with the same product name.
     0.894
CF8_2207
Regulatory protein, TetR.
 
     0.813
CF8_2226
Lipid-transfer protein.
  
  0.808
CF8_2189
acetyl-CoA acetyltransferase.
  
  0.763
CF8_2047
Coenzyme A transferase.
  
 
  0.761
CF8_2215
Glyoxalase/bleomycin resistance.
  
 
  0.760
CF8_2048
Putative CoA transferase beta subunit.
  
 
  0.753
CF8_2227
Hypothetical protein.
  
  
  0.751
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.