STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2247Short-chain dehydrogenase/reductase SDR. (302 aa)    
Predicted Functional Partners:
CF8_2219
Dehydratase.
 
  0.937
CF8_1141
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.879
CF8_1144
(Acyl-carrier-protein) S-malonyltransferase.
 0.854
CF8_2246
Short-chain dehydrogenase/reductase SDR.
 
  
 
0.853
CF8_2248
Hypothetical protein.
 
  
  0.843
CF8_0565
Short-chain dehydrogenase/reductase SDR.
 
0.818
CF8_2503
Glutamate synthase (NADH) large subunit.
     
 0.794
CF8_2250
FtsQ.
   
   0.775
CF8_2251
Hypothetical protein.
   
   0.775
CF8_2249
FAD-dependent pyridine nucleotide-disulfide.
    
  0.773
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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