Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_2269Hypothetical protein. (425 aa)    
Predicted Functional Partners:
CF8_3110
Glycerophosphoryl diester phosphodiesterase.
 
  
  0.922
CF8_3111
Glycerophosphoryl diester phosphodiesterase.
 
  
  0.916
CF8_1290
ABC sugar transporter.
 
      0.768
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.690
CF8_2270
Hypothetical protein.
       0.615
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
  
    0.601
hisE
phosphoribosyl-ATP pyrophosphatase.
       0.562
CF8_2277
Diaminohydroxyphosphoribosylaminopyrimidine; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.500
CF8_3459
Hypothetical protein.
   
  0.500
CF8_0424
uroporphyrinogen-III synthase.
   
 
  0.498
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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