STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2467GCN5-related N-acetyltransferase. (234 aa)    
Predicted Functional Partners:
CF8_2468
Hypothetical protein.
       0.723
CF8_2469
Hypothetical protein.
       0.723
CF8_2470
Hypothetical protein.
       0.723
CF8_0047
Hypothetical protein.
  
     0.699
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
       0.628
CF8_2503
Glutamate synthase (NADH) large subunit.
   
 
 0.614
CF8_0861
Hypothetical protein.
  
  
  0.591
CF8_0666
Aminoglycoside phosphotransferase.
  
 
   0.588
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
    
  0.581
CF8_2708
Acetyltransferase.
  
 
  0.560
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.