Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CF8_2467GCN5-related N-acetyltransferase. (234 aa)    
Predicted Functional Partners:
CF8_2468
Hypothetical protein.
       0.723
CF8_2469
Hypothetical protein.
       0.723
CF8_2470
Hypothetical protein.
       0.723
CF8_0047
Hypothetical protein.
  
     0.699
CF8_2503
Glutamate synthase (NADH) large subunit.
   
 
 0.654
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
       0.628
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
    
  0.604
CF8_2708
Acetyltransferase.
  
    0.556
CF8_0861
Hypothetical protein.
  
  
  0.550
CF8_2461
Methyltransferase type 12.
 
    0.550
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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