Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CF8_2539 | CF8_2540 | CF8_2539 | CF8_2540 | Hypothetical protein. | UspA domain-containing protein. | 0.532 |
| CF8_2539 | CF8_2541 | CF8_2539 | CF8_2541 | Hypothetical protein. | HhH-GPD family protein. | 0.521 |
| CF8_2540 | CF8_2539 | CF8_2540 | CF8_2539 | UspA domain-containing protein. | Hypothetical protein. | 0.532 |
| CF8_2540 | CF8_2541 | CF8_2540 | CF8_2541 | UspA domain-containing protein. | HhH-GPD family protein. | 0.766 |
| CF8_2540 | CF8_2902 | CF8_2540 | CF8_2902 | UspA domain-containing protein. | methylated-DNA--protein-cysteine; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.429 |
| CF8_2540 | hpf | CF8_2540 | CF8_1195 | UspA domain-containing protein. | Sigma 54 modulation protein / SSU ribosomal; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.435 |
| CF8_2540 | sigA | CF8_2540 | CF8_2542 | UspA domain-containing protein. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.503 |
| CF8_2541 | CF8_2539 | CF8_2541 | CF8_2539 | HhH-GPD family protein. | Hypothetical protein. | 0.521 |
| CF8_2541 | CF8_2540 | CF8_2541 | CF8_2540 | HhH-GPD family protein. | UspA domain-containing protein. | 0.766 |
| CF8_2541 | sigA | CF8_2541 | CF8_2542 | HhH-GPD family protein. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.437 |
| CF8_2902 | CF8_2540 | CF8_2902 | CF8_2540 | methylated-DNA--protein-cysteine; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | UspA domain-containing protein. | 0.429 |
| CF8_2902 | sigA | CF8_2902 | CF8_2542 | methylated-DNA--protein-cysteine; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.608 |
| hpf | CF8_2540 | CF8_1195 | CF8_2540 | Sigma 54 modulation protein / SSU ribosomal; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | UspA domain-containing protein. | 0.435 |
| sigA | CF8_2540 | CF8_2542 | CF8_2540 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | UspA domain-containing protein. | 0.503 |
| sigA | CF8_2541 | CF8_2542 | CF8_2541 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | HhH-GPD family protein. | 0.437 |
| sigA | CF8_2902 | CF8_2542 | CF8_2902 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | methylated-DNA--protein-cysteine; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.608 |