Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_2831Glycosyl transferase, group 1. (409 aa)    
Predicted Functional Partners:
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.793
CF8_1250
UvrD/REP helicase.
    
 
 0.706
CF8_2830
Hypothetical protein.
    
  0.686
CF8_2623
Type III restriction enzyme.
    
  0.676
CF8_1490
Alpha-glucan phosphorylase.
  
 0.651
CF8_4123
Hypothetical protein.
     
  0.587
rlmN
Radical SAM protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.548
CF8_2836
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
  0.541
CF8_3188
Glucose-1-phosphate cytidylyltransferase.
  
 0.514
CF8_2870
Glycosyl transferase family 2.
  
 
 0.501
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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