Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_2864Ammonium transporter. (444 aa)    
Predicted Functional Partners:
CF8_2865
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 0.999
CF8_2503
Glutamate synthase (NADH) large subunit.
 
  
 0.849
CF8_3398
Hypothetical protein.
   
 0.700
glnD
PII uridylyl-transferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
 
   
 0.673
CF8_2866
Ammonium transporter.
 
    
0.536
CF8_2995
ANTAR domain-containing protein.
  
 
 0.492
CF8_1693
ATPase domain-containing protein.
    
 0.490
CF8_2596
L-glutamine synthetase.
  
  
 0.472
CF8_1637
L-glutamine synthetase.
  
  
 0.471
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.428
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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