Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_2997Regulatory protein, LuxR. (217 aa)    
Predicted Functional Partners:
CF8_3398
Hypothetical protein.
  
 0.958
CF8_2224
ATPase domain-containing protein.
 
 0.844
CF8_2742
ATPase domain-containing protein.
  
  0.826
CF8_3563
Histidine kinase, dimerization and.
  
  0.811
CF8_1518
ATPase domain-containing protein.
  
  0.809
CF8_3509
Histidine kinase, dimerization and.
  
  0.799
CF8_3510
Two component LuxR family transcriptional.
  
     0.757
CF8_2743
Response regulator receiver.
  
     0.753
CF8_1021
Response regulator receiver.
  
     0.747
CF8_1165
GAF domain-containing protein.
 
 0.746
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.