Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CF8_3000CoA-binding domain-containing protein. (137 aa)    
Predicted Functional Partners:
CF8_0582
Threonine dehydratase.
    
  0.816
CF8_1956
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.806
CF8_3153
Cystathionine beta-synthase.
    
  0.801
CF8_2999
Transcriptional regulator.
       0.763
CF8_3001
Class I peptide chain release factor.
       0.758
CF8_3660
Cystathionine gamma-synthase.
 
   
  0.606
CF8_4163
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
    
  0.590
CF8_2998
acyl-CoA dehydrogenase domain-containing.
       0.551
CF8_2289
S-adenosylmethionine synthetase.
    
  0.493
CF8_0586
Cystathionine gamma-lyase.
 
   
  0.468
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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