STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3016Extracellular solute-binding protein. (338 aa)    
Predicted Functional Partners:
CF8_3017
Binding-protein-dependent transport system.
 
 0.996
CF8_3018
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 0.986
CF8_0290
Binding-protein-dependent transport system.
  
 
 0.921
CF8_0812
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 
 0.779
CF8_3300
AMP-dependent synthetase and ligase.
 
     0.639
CF8_0291
ABC transporter-like protein.
 
  0.628
CF8_0182
ABC transporter-like protein; Belongs to the ABC transporter superfamily.
 
 
  0.577
CF8_0804
ABC transporter.
  
 
  0.577
CF8_1693
ATPase domain-containing protein.
     
 0.553
CF8_3015
butyryl-CoA dehydrogenase.
       0.546
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (22%) [HD]