STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3055Dehydratase. (150 aa)    
Predicted Functional Partners:
CF8_0045
Alcohol dehydrogenase.
 
  0.859
CF8_0229
Peptidase S1 and S6, chymotrypsin/Hap.
    
  0.673
CF8_0736
Peptidase S1 and S6, chymotrypsin/Hap.
    
  0.673
CF8_0877
Peptidase S1 and S6, chymotrypsin/Hap.
    
  0.673
CF8_1512
Alanine-glyoxylate aminotransferase.
   
 
  0.653
CF8_1144
(Acyl-carrier-protein) S-malonyltransferase.
     
 0.635
CF8_2094
Catalase.
   
  0.603
CF8_3256
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  0.603
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
     
 0.600
CF8_0735
acyl-CoA dehydrogenase domain-containing.
  
  0.598
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.