Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CF8_3073Integral membrane protein. (257 aa)    
Predicted Functional Partners:
CF8_3071
Fumarate reductase iron-sulfur subunit.
 
 
 
 0.983
CF8_3072
Succinate dehydrogenase flavoprotein subunit.
 
 
 
 0.975
CF8_3076
Succinate dehydrogenase/fumarate reductase.
   
 
 0.884
CF8_3075
Succinate dehydrogenase flavoprotein subunit.
   
 
 0.830
CF8_3074
Succinate dehydrogenase subunit C.
       0.517
CF8_0124
Hypothetical protein.
   
   0.476
CF8_2054
Hypothetical protein.
   
   0.476
CF8_2218
3-ketosteroid-delta-1-dehydrogenase.
   
   0.476
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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