Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_3133Succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (538 aa)    
Predicted Functional Partners:
CF8_3050
Aldehyde dehydrogenase.
 
     0.936
CF8_0329
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.926
CF8_3076
Succinate dehydrogenase/fumarate reductase.
   
 
 0.868
CF8_2503
Glutamate synthase (NADH) large subunit.
  
 
 0.861
CF8_3263
PTS system glucose-like transporter subunit IIB.
   
 
 0.856
CF8_3132
Glucose-methanol-choline oxidoreductase.
  
 
  0.802
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.780
CF8_1408
Alpha-ketoglutarate decarboxylase.
  
 0.780
CF8_3075
Succinate dehydrogenase flavoprotein subunit.
   
  0.779
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
 0.765
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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