Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CF8_3189C-methyltransferase. (388 aa)    
Predicted Functional Partners:
CF8_3179
UDP-galactose 4-epimerase.
     0.971
CF8_3188
Glucose-1-phosphate cytidylyltransferase.
 
     0.945
CF8_3178
Hypothetical protein.
 
 
   0.832
CF8_0344
Hypothetical protein.
   
 0.831
CF8_3180
GlcNAc-PI de-N-acetylase.
 
     0.828
CF8_3348
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
    
 0.752
CF8_0369
FAD dependent oxidoreductase; Belongs to the GcvT family.
   
 0.705
CF8_3187
Glycosyltransferase 28 domain protein.
       0.693
CF8_3186
Polysaccharide biosynthesis protein.
 
     0.683
CF8_1218
Hypothetical protein.
   
   0.627
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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