Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
CF8_3199Lipase, class 2. (225 aa)    
Predicted Functional Partners:
CF8_0884
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
  
  
  0.724
CF8_2230
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
     
  0.684
CF8_2185
Hypothetical protein.
     
  0.676
CF8_1981
Diacylglycerol kinase, catalytic region.
     
  0.588
CF8_3675
Diacylglycerol kinase, catalytic region.
     
  0.588
CF8_3140
Hypothetical protein.
  
 
   0.587
CF8_3143
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
     
  0.582
CF8_3241
Diacylglycerol O-acyltransferase; Belongs to the long-chain O-acyltransferase family.
     
  0.582
CF8_3200
Hypothetical protein.
       0.574
rplC
50S ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
   
   0.537
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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