STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3208Hypothetical protein. (502 aa)    
Predicted Functional Partners:
CF8_3183
O-antigen polymerase.
 
     0.757
CF8_2451
Endonuclease/exonuclease/phosphatase.
  
 
 0.734
CF8_0777
Hypothetical protein.
    
   0.664
CF8_0652
Peptidase S8 and S53, subtilisin, kexin.
   
  0.642
CF8_3181
Glycosyl transferase family 2.
  
     0.617
CF8_0117
Cell division FtsK/SpoIIIE.
    
   0.592
CF8_0803
Regulatory P domain-containing protein.
   
  0.592
CF8_2446
Cell division FtsK/SpoIIIE.
    
   0.592
CF8_2221
Hypothetical protein.
    
   0.562
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.533
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.