Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rnhARibonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (297 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 0.873
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
 0.837
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
  
 
  0.813
CF8_3300
AMP-dependent synthetase and ligase.
 
     0.689
CF8_1221
Phosphoglycerate mutase.
 
  
  0.682
CF8_1059
Single-strand binding protein.
   
 0.661
CF8_1760
Single-strand binding protein/primosomal.
   
 0.661
CF8_2090
Single-strand binding protein/primosomal.
   
 0.661
CF8_2385
Single-strand binding protein/primosomal.
   
 0.661
CF8_3763
Single-strand binding protein.
   
 0.661
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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