STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3323Sugar transferase. (221 aa)    
Predicted Functional Partners:
CF8_3365
Capsular exopolysaccharide family.
 
 
 0.997
CF8_3348
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.982
CF8_3181
Glycosyl transferase family 2.
 
 0.978
CF8_2870
Glycosyl transferase family 2.
 
 
 0.976
CF8_3328
dTDP-4-keto-L-rhamnose reductase and; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.971
CF8_3347
NAD dependent epimerase/dehydratase.
  
 
 0.970
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.967
CF8_3322
NAD-dependent epimerase/dehydratase.
  
  
 0.967
CF8_2980
Mannose-1-phosphate guanylyltransferase (GDP).
  
 
 0.950
CF8_3329
Hypothetical protein.
    
  0.940
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.