Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_33393-keto-5-aminohexanoate cleavage enzyme. (277 aa)    
Predicted Functional Partners:
CF8_1990
3-aminobutyryl-CoA ammonia-lyase.
  
 0.995
CF8_1987
L-erythro-3,5-diaminohexanoate dehydrogenase.
 
  
  0.937
CF8_4226
Hypothetical protein.
 
  
 0.901
CF8_1988
D-lysine 5,6-aminomutase alpha subunit.
 
   
 0.786
CF8_1989
Beta-lysine 5,6-aminomutase beta subunit.
 
   
 0.786
CF8_1986
L-lysine 2,3-aminomutase.
 
   
 0.697
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.646
CF8_0584
Hypothetical protein.
  
     0.621
CF8_0343
Cyclase family protein.
  
  
 0.582
CF8_2990
Thioesterase superfamily protein.
    
 0.519
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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