Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_3349Sugar transferase. (210 aa)    
Predicted Functional Partners:
CF8_3348
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.924
CF8_3365
Capsular exopolysaccharide family.
 
 
 0.900
CF8_3352
Polysaccharide biosynthesis protein CapD.
 
 
 0.885
CF8_3353
Polysaccharide biosynthesis protein CapD.
 
 
 0.845
CF8_3351
Glycosyl transferase.
 
 
 0.840
CF8_3350
Hypothetical protein.
 
     0.810
CF8_3347
NAD dependent epimerase/dehydratase.
  
  
 0.766
CF8_3181
Glycosyl transferase family 2.
  
 
 0.730
CF8_3346
O-antigen biosynthesis protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.725
CF8_2870
Glycosyl transferase family 2.
 
 
 0.683
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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