Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_3353Polysaccharide biosynthesis protein CapD. (605 aa)    
Predicted Functional Partners:
CF8_3347
NAD dependent epimerase/dehydratase.
 
 
 0.979
CF8_3348
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.966
CF8_3346
O-antigen biosynthesis protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.918
CF8_3349
Sugar transferase.
 
 
 0.845
CF8_3351
Glycosyl transferase.
 
    0.827
CF8_3365
Capsular exopolysaccharide family.
 
 
 0.819
CF8_3350
Hypothetical protein.
 
    0.698
CF8_3352
Polysaccharide biosynthesis protein CapD.
 
    
0.687
CF8_3328
dTDP-4-keto-L-rhamnose reductase and; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 
 0.670
glmU
Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
    
 0.655
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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