Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3418Peptidoglycan binding domain-containing protein. (468 aa)    
Predicted Functional Partners:
CF8_1226
ErfK/YbiS/YcfS/YnhG family protein.
  
     0.732
CF8_0136
LuxR family transcriptional regulator.
  
     0.689
CF8_3095
Hypothetical protein.
  
    0.682
crgA
Hypothetical protein; Involved in cell division; Belongs to the CrgA family.
  
     0.645
CF8_3601
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.622
CF8_3206
Hypothetical protein.
  
     0.605
CF8_2805
Hypothetical protein.
  
     0.595
CF8_2495
Hypothetical protein.
  
     0.584
CF8_2321
Hypothetical protein.
  
     0.580
CF8_3271
Metallophosphoesterase.
  
     0.572
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.