Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CF8_3428 | CF8_3429 | CF8_3428 | CF8_3429 | Hypothetical protein. | Hypothetical protein. | 0.543 |
CF8_3428 | CF8_3430 | CF8_3428 | CF8_3430 | Hypothetical protein. | Sigma-70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.543 |
CF8_3428 | purC | CF8_3428 | CF8_3427 | Hypothetical protein. | Phosphoribosylaminoimidazole-succinocarboxamide; Belongs to the SAICAR synthetase family. | 0.768 |
CF8_3429 | CF8_3428 | CF8_3429 | CF8_3428 | Hypothetical protein. | Hypothetical protein. | 0.543 |
CF8_3429 | CF8_3430 | CF8_3429 | CF8_3430 | Hypothetical protein. | Sigma-70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.780 |
CF8_3429 | CF8_3431 | CF8_3429 | CF8_3431 | Hypothetical protein. | Acylphosphatase. | 0.486 |
CF8_3429 | purC | CF8_3429 | CF8_3427 | Hypothetical protein. | Phosphoribosylaminoimidazole-succinocarboxamide; Belongs to the SAICAR synthetase family. | 0.544 |
CF8_3430 | CF8_3428 | CF8_3430 | CF8_3428 | Sigma-70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.543 |
CF8_3430 | CF8_3429 | CF8_3430 | CF8_3429 | Sigma-70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.780 |
CF8_3430 | CF8_3431 | CF8_3430 | CF8_3431 | Sigma-70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily. | Acylphosphatase. | 0.486 |
CF8_3430 | purC | CF8_3430 | CF8_3427 | Sigma-70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily. | Phosphoribosylaminoimidazole-succinocarboxamide; Belongs to the SAICAR synthetase family. | 0.544 |
CF8_3431 | CF8_3429 | CF8_3431 | CF8_3429 | Acylphosphatase. | Hypothetical protein. | 0.486 |
CF8_3431 | CF8_3430 | CF8_3431 | CF8_3430 | Acylphosphatase. | Sigma-70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.486 |
purC | CF8_3428 | CF8_3427 | CF8_3428 | Phosphoribosylaminoimidazole-succinocarboxamide; Belongs to the SAICAR synthetase family. | Hypothetical protein. | 0.768 |
purC | CF8_3429 | CF8_3427 | CF8_3429 | Phosphoribosylaminoimidazole-succinocarboxamide; Belongs to the SAICAR synthetase family. | Hypothetical protein. | 0.544 |
purC | CF8_3430 | CF8_3427 | CF8_3430 | Phosphoribosylaminoimidazole-succinocarboxamide; Belongs to the SAICAR synthetase family. | Sigma-70, region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.544 |