Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3514Nitroreductase. (206 aa)    
Predicted Functional Partners:
CF8_1923
uroporphyrinogen-III C-methyltransferase.
  
 
 0.722
CF8_0424
uroporphyrinogen-III synthase.
  
 
 0.686
CF8_3515
Hypothetical protein.
       0.664
CF8_1236
UBA/THIF-type NAD/FAD binding protein.
    
 0.644
CF8_2826
Protein of unknown function RIO1.
  
     0.582
CF8_3513
Cystathionine beta-synthase.
  
    0.567
cobT
Nicotinate-nucleotide--dimethylbenzimidazole; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
 
 0.466
CF8_0551
Riboflavin kinase / FMN adenylyltransferase.
    
 0.443
CF8_2806
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.443
CF8_2186
Luciferase family protein.
  
    0.442
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.