STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3530Regulatory protein, IclR. (247 aa)    
Predicted Functional Partners:
CF8_0936
Transcriptional regulator.
  
     0.731
CF8_1579
Transcriptional regulator.
  
     0.677
CF8_3529
Hypothetical protein.
       0.642
CF8_3528
Histidine ammonia-lyase.
 
  
  0.627
CF8_0997
Regulatory protein, IclR.
  
     0.579
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
     0.542
CF8_1616
Allophanate hydrolase subunit 1.
  
    0.481
CF8_1615
Urea amidolyase related protein.
  
    0.455
CF8_0162
Trap dicarboxylate transporter, dctm subunit.
 
  
  0.444
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.