STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3542Ferric enterobactin transport system, permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (357 aa)    
Predicted Functional Partners:
CF8_3541
ABC transporter-like protein.
 
 
 0.976
CF8_3544
Iron ABC transporter, substrate binding protein.
 
 
 0.964
CF8_3543
Transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.940
CF8_1308
ABC transporter-like protein.
 
 
 0.894
CF8_3540
FAD-binding 9, siderophore-interacting.
 
    0.861
CF8_1311
Ferric siderophore ABC superfamily ATP binding.
 
 
 0.795
CF8_1310
Ferric siderophore ABC superfamily ATP binding; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
0.699
CF8_0001
Protease, transglutaminase-like protein.
  
     0.571
dcd
Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate.
       0.532
CF8_3546
GDSL family lipase.
       0.400
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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