Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CF8_3555Nuclear transport factor 2. (157 aa)    
Predicted Functional Partners:
CF8_2218
3-ketosteroid-delta-1-dehydrogenase.
  
  
  0.911
CF8_2226
Lipid-transfer protein.
  
  
  0.911
CF8_2054
Hypothetical protein.
  
  
  0.857
CF8_2188
Lipid-transfer protein.
 
  
  0.837
CF8_2187
Hypothetical protein.
 
     0.824
CF8_0124
Hypothetical protein.
  
  
  0.823
CF8_2189
acetyl-CoA acetyltransferase.
  
  
  0.811
CF8_2170
Rieske (2Fe-2S) domain-containing protein.
 
     0.770
CF8_3495
Hypothetical protein.
  
     0.760
CF8_0283
Dihydrodipicolinate reductase.
  
     0.754
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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