STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3700Hypothetical protein. (98 aa)    
Predicted Functional Partners:
CF8_3703
Heavy metal translocating P-type ATPase; Overlaps another CDS with the same product name.
 
  
 0.614
CF8_0757
Alcohol dehydrogenase.
  
  
 0.582
CF8_3702
Heavy metal translocating P-type ATPase; Overlaps another CDS with the same product name.
     
 0.549
CF8_1393
Sigma-70 region 2 domain-containing protein; Belongs to the sigma-70 factor family.
    
   0.507
CF8_3531
Sigma-70 region 4 domain-containing protein; Belongs to the sigma-70 factor family.
    
   0.507
CF8_3699
Glycerophosphoryl diester phosphodiesterase.
       0.475
CF8_3935
Heavy metal transport/detoxification protein.
  
  
 0.445
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.