STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3744Putative lipoate-protein ligase A. (246 aa)    
Predicted Functional Partners:
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
 0.985
CF8_1408
Alpha-ketoglutarate decarboxylase.
  
 0.960
CF8_3598
Dehydrogenase catalytic domain-containing.
 
 0.933
CF8_3599
Transketolase, central region.
  
 
 0.889
CF8_3600
Pyruvate dehydrogenase (acetyl-transferring).
  
 
 0.878
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
 
 0.834
CF8_2266
FAD-dependent pyridine nucleotide-disulfide.
  
 
 0.830
CF8_2429
Dihydrolipoamide dehydrogenase.
  
 
 0.830
CF8_3031
Flavoprotein disulfide reductase.
  
 
 0.830
CF8_3032
Dihydrolipoamide dehydrogenase.
  
 
 0.830
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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