STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3779Integral membrane protein MviN. (552 aa)    
Predicted Functional Partners:
CF8_0019
Forkhead-associated protein.
  
 
 
 0.976
CF8_3778
Hypothetical protein.
 
     0.833
CF8_3780
Serine/threonine protein kinase.
      0.814
CF8_2034
Forkhead-associated protein.
  
 
   0.731
CF8_0018
Forkhead-associated protein.
  
 
   0.673
CF8_3781
RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily.
       0.645
CF8_3777
HDIG domain-containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
     0.615
CF8_0649
Forkhead-associated protein.
    
   0.562
CF8_0702
Hypothetical protein.
    
   0.562
CF8_1551
DNA polymerase III, delta subunit.
 
  
 0.519
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.