STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3907Hypothetical protein. (166 aa)    
Predicted Functional Partners:
CF8_0005
Hypothetical protein.
  
 
   0.851
CF8_3906
Hypothetical protein.
 
     0.851
CF8_2413
Hypothetical protein.
  
     0.746
CF8_1208
Endonuclease/exonuclease/phosphatase.
  
 0.743
CF8_3905
Hypothetical protein.
       0.673
CF8_2763
Rieske (2Fe-2S) domain-containing protein.
  
     0.670
CF8_2431
Hypothetical protein.
    
 0.655
CF8_3121
Tryptase.
    
 0.655
CF8_1098
Rod shape-determining protein.
  
     0.648
CF8_3912
Hypothetical protein.
 
     0.635
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.