STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_3972Cytochrome c biogenesis protein transmembrane. (298 aa)    
Predicted Functional Partners:
CF8_3973
Na+/H+ antiporter NhaA.
 
   
 0.928
CF8_0432
Cytochrome c assembly protein.
  
  
 0.828
CF8_3974
Hypothetical protein.
 
     0.818
CF8_0431
ResB family protein.
  
  
 0.782
CF8_0429
Redoxin domain-containing protein.
 
  
 0.700
CF8_2606
Na+/H+ antiporter NhaA.
 
   
 0.685
CF8_3975
ArsR family transcriptional regulator.
     
 0.554
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
  
 0.449
CF8_2605
Integral membrane protein.
 
     0.435
CF8_0424
uroporphyrinogen-III synthase.
  
    0.419
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.