Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_4017Phenylacetic acid degradation-related protein. (145 aa)    
Predicted Functional Partners:
CF8_4016
4-carboxymuconolactone decarboxylase domain protein.
       0.773
menB
1,4-dihydroxy-2-naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
    
 0.622
menA
1,4-dihydroxy-2-naphthoate; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
  0.592
CF8_4018
Formyl-CoA transferase; Belongs to the CoA-transferase III family.
       0.576
CF8_4019
MmgE/PrpD.
       0.576
CF8_4014
3-hydroxyisobutyrate dehydrogenase.
 
    0.566
CF8_3201
phenylacetate-CoA oxygenase/reductase, PaaK.
  
 
  0.461
CF8_4020
acyl-CoA dehydrogenase domain-containing.
  
    0.458
CF8_4021
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.458
CF8_4022
Hypothetical protein.
       0.458
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.