STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF8_4034Hydrogenase-2, large subunit. (545 aa)    
Predicted Functional Partners:
CF8_4033
Hydrogenase (NiFe) small subunit HydA.
 
 0.999
CF8_4035
Hydrogenase maturation protease.
 
 0.989
hypA
Hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.987
CF8_4032
Hypothetical protein.
   
   0.958
CF8_4036
TPR repeat-containing protein.
 
     0.958
CF8_0467
Pyruvate flavodoxin/ferredoxin oxidoreductase.
   
 
 0.957
CF8_4040
Hydrogenase assembly chaperone hypC/hupF.
 
 
 0.957
CF8_4045
Hydrogenase expression/formation protein HypD.
 
 
 0.950
CF8_4039
NiFe hydrogenase maturation protein.
 
 
 
 0.948
CF8_4037
Nitrogen-fixing NifU domain-containing protein.
 
   
 0.944
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.