Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CF8_4116Hypothetical protein. (260 aa)    
Predicted Functional Partners:
CF8_4115
Hypothetical protein.
 
     0.946
CF8_4114
ABC transporter-like protein.
 
  0.913
CF8_4109
ABC transporter-like protein.
  
  0.552
CF8_4101
Hypothetical protein.
  
     0.502
CF8_3459
Hypothetical protein.
  
     0.497
CF8_4089
Hypothetical protein; Overlaps another CDS with the same product name.
  
  0.467
CF8_3891
Integral membrane protein.
  
     0.466
CF8_0666
Aminoglycoside phosphotransferase.
  
     0.449
CF8_4113
Major facilitator transporter.
       0.445
CF8_2013
Transcriptional regulator.
  
     0.439
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.