Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CF8_4119Dolichyl-phosphate beta-D-mannosyltransferase. (770 aa)    
Predicted Functional Partners:
CF8_4117
Hypothetical protein.
  
 
  0.801
CF8_4120
GtrA family protein.
  
 
  0.792
CF8_4118
Undecaprenyl-diphosphatase.
    
  0.783
CF8_3857
Glycosyl transferase family protein.
   
 0.682
CF8_4122
ATPase domain-containing protein.
   
   0.660
CF8_4121
Two component transcriptional regulator.
       0.639
CF8_3181
Glycosyl transferase family 2.
 
 
 0.564
thrS
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
  0.549
CF8_1114
Glycosyl transferase family 2.
  
  
 
0.501
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
    
   0.463
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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