Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CF8_4252IstB ATP binding domain-containing protein. (251 aa)    
Predicted Functional Partners:
CF8_4253
Hypothetical protein.
 
 
 0.947
CF8_3757
DnaB domain-containing protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 0.881
CF8_0529
DnaB domain protein helicase domain protein.
  
 0.879
CF8_0531
DnaB domain protein helicase domain protein.
  
 0.879
CF8_4148
Integrase catalytic subunit.
 
 
 0.805
CF8_1250
UvrD/REP helicase.
     
 0.804
CF8_0934
Integrase.
 
 
 0.749
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
     
 0.694
CF8_1749
DNA primase catalytic core.
    
 0.670
CF8_3976
DNA primase catalytic core.
    
 0.670
Your Current Organism:
Nocardioides sp. CF8
NCBI taxonomy Id: 110319
Other names: N. sp. CF8
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