STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P186_1857Regulatory protein, ArsR. (91 aa)    
Predicted Functional Partners:
gch3
GTP cyclohydrolase IIa; Catalyzes the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. Also has an independent pyrophosphate phosphohydrolase activity; Belongs to the archaeal-type GTP cyclohydrolase family.
  
     0.497
P186_2616
Lysine exporter protein (LYSE/YGGA).
 
     0.496
P186_1780
Cation-transporting ATPase (P-type).
  
  
 0.484
P186_0026
N-acyltransferase.
 
   
 0.439
gap
Glyceraldehyde-3-phosphate dehydrogenase.
 
   
 0.427
P186_0629
Transcriptional regulatory protein, putative.
 
  
 0.425
P186_1526
Type II secretion system protein E.
  
     0.411
P186_0453
Phosphate uptake regulator, PhoU.
 
   
 0.403
Your Current Organism:
Pyrobaculum ferrireducens
NCBI taxonomy Id: 1104324
Other names: DSM 28942, P. ferrireducens, Pyrobaculum ferrireducens Slobodkina et al. 2015, VKM B-2856
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