STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000406005_00153Unannotated protein. (862 aa)    
Predicted Functional Partners:
GCA_000406005_04574
Unannotated protein.
     
 0.957
GCA_000406005_00049
Unannotated protein.
 
 
 0.924
GCA_000406005_03837
Unannotated protein.
 
 
 0.922
GCA_000406005_02204
Unannotated protein.
    
 0.921
GCA_000406005_03836
Unannotated protein.
 
 
 0.895
GCA_000406005_00048
Unannotated protein.
 
 
 0.894
GCA_000406005_00045
Unannotated protein.
 
 
 0.888
GCA_000406005_00047
Unannotated protein.
 
 
 0.885
GCA_000406005_01128
Unannotated protein.
  
 
 
 0.783
GCA_000406005_00152
Unannotated protein.
       0.773
Your Current Organism:
Poribacteria bacterium WGA3G
NCBI taxonomy Id: 1104566
Other names: C. Poribacteria bacterium WGA-3G, Candidatus Poribacteria bacterium WGA-3G, Candidatus Poribacteria sp. WGA-3G, Poribacteria bacterium WGA-3G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.