STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000406005_00693Unannotated protein. (1249 aa)    
Predicted Functional Partners:
GCA_000406005_04274
Unannotated protein.
  
  
 0.871
GCA_000406005_03387
Unannotated protein.
  
    0.847
GCA_000406005_00746
Unannotated protein.
  
  
 0.840
GCA_000406005_03771
Unannotated protein.
  
  
 0.840
GCA_000406005_02426
Unannotated protein.
  
    0.830
GCA_000406005_00260
Unannotated protein.
 
    0.823
GCA_000406005_00567
Unannotated protein.
   
    0.821
GCA_000406005_02407
Unannotated protein.
 
    0.802
GCA_000406005_01994
Unannotated protein.
    0.769
GCA_000406005_03324
Unannotated protein.
     0.768
Your Current Organism:
Poribacteria bacterium WGA3G
NCBI taxonomy Id: 1104566
Other names: C. Poribacteria bacterium WGA-3G, Candidatus Poribacteria bacterium WGA-3G, Candidatus Poribacteria sp. WGA-3G, Poribacteria bacterium WGA-3G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.