STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000406005_01551Unannotated protein. (256 aa)    
Predicted Functional Partners:
GCA_000406005_00692
Unannotated protein.
  
     0.774
GCA_000406005_00505
Unannotated protein.
  
     0.762
GCA_000406005_03309
Unannotated protein.
   
 
 0.625
GCA_000406005_01552
Unannotated protein.
       0.563
GCA_000406005_01550
Unannotated protein.
 
    
0.544
GCA_000406005_03492
Unannotated protein.
    
  0.454
GCA_000406005_01841
Unannotated protein.
    
 0.445
GCA_000406005_01553
Unannotated protein.
       0.441
GCA_000406005_01554
Unannotated protein.
       0.441
GCA_000406005_01549
Unannotated protein.
       0.423
Your Current Organism:
Poribacteria bacterium WGA3G
NCBI taxonomy Id: 1104566
Other names: C. Poribacteria bacterium WGA-3G, Candidatus Poribacteria bacterium WGA-3G, Candidatus Poribacteria sp. WGA-3G, Poribacteria bacterium WGA-3G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.