STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000406005_01641Unannotated protein. (575 aa)    
Predicted Functional Partners:
GCA_000406005_01640
Unannotated protein.
       0.788
GCA_000406005_00604
Unannotated protein.
    
  0.569
GCA_000406005_01683
Unannotated protein.
    
  0.569
GCA_000406005_03329
Unannotated protein.
    
  0.569
GCA_000406005_04373
Unannotated protein.
    
  0.569
GCA_000406005_00546
Unannotated protein.
   
    0.532
GCA_000406005_02350
Unannotated protein.
     
 0.529
GCA_000406005_03119
Unannotated protein.
     
 0.529
GCA_000406005_01775
Unannotated protein.
   
 
  0.487
GCA_000406005_01642
Unannotated protein.
       0.473
Your Current Organism:
Poribacteria bacterium WGA3G
NCBI taxonomy Id: 1104566
Other names: C. Poribacteria bacterium WGA-3G, Candidatus Poribacteria bacterium WGA-3G, Candidatus Poribacteria sp. WGA-3G, Poribacteria bacterium WGA-3G
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.